Gets the current number of infected hosts for the full length of the simulation

This function computes from the output of a nosoiSim simulation the dynamic count of infected hosts at each time step (and each state if discrete structure) of the simulation. The output is a data.table.

getDynamic(nosoi.output)

Arguments

nosoi.output	Output of a nosoi simulation (object of class nosoiSim).

Value

The output is a data.table with the following structure:

state

(only when discrete structure) Given state

Count

Current number of infected hosts at given time-step.

type

Host-type, identified by its user-defined prefix.

t

Time-step (integer).

See also

summary.nosoiSim